Primary Literature
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- Dickinson Q, et al. (2026) Partitioning of parental histones between leading and lagging strands is modulated by DNA polymerase dosage. Nucleic Acids Res 54(15) PMID: 42581759
- Canal B, et al. (2025) The DNA replication checkpoint limits Okazaki fragment accumulation to protect and restart stalled forks. Mol Cell 85(13):2462-2473.e6 PMID: 40578347
- Marks SA, et al. (2024) Evidence that DNA polymerase δ proofreads errors made by DNA polymerase α across the Saccharomyces cerevisiae nuclear genome. DNA Repair (Amst) 143:103768 PMID: 39332392
- Mayle R, et al. (2024) DNA polymerase ζ has robust reverse transcriptase activity relative to other cellular DNA polymerases. J Biol Chem 300(12):107918 PMID: 39454951
- Al-Zain AM, et al. (2023) Double-strand breaks induce inverted duplication chromosome rearrangements by a DNA polymerase δ-dependent mechanism. Nat Commun 14(1):7020 PMID: 37919272
- Cerqueira PG, et al. (2023) Saccharomyces cerevisiae DNA polymerase IV overcomes Rad51 inhibition of DNA polymerase δ in Rad52-mediated direct-repeat recombination. Nucleic Acids Res 51(11):5547-5564 PMID: 37070185
- Dmowski M, et al. (2023) Impairment of the non-catalytic subunit Dpb2 of DNA Pol ɛ results in increased involvement of Pol δ on the leading strand. DNA Repair (Amst) 129:103541 PMID: 37481989
- Chanet R, et al. (2021) Fe-S coordination defects in the replicative DNA polymerase delta cause deleterious DNA replication in vivo and subsequent DNA damage in the yeast Saccharomyces cerevisiae. G3 (Bethesda) 11(7) PMID: 34009341
- Jiang G, et al. (2021) Molecular Mechanism of the Cytosine CRISPR Base Editing Process and the Roles of Translesion DNA Polymerases. ACS Synth Biol 10(12):3353-3358 PMID: 34851089
- Koussa NC and Smith DJ (2021) Limiting DNA polymerase delta alters replication dynamics and leads to a dependence on checkpoint activation and recombination-mediated DNA repair. PLoS Genet 17(1):e1009322 PMID: 33493195
- Kumari P, et al. (2021) Interdomain connecting loop and J loop structures determine cross-species compatibility of PCNA. J Biol Chem 297(1):100911 PMID: 34175309
- Neil AJ, et al. (2021) Replication-independent instability of Friedreich's ataxia GAA repeats during chronological aging. Proc Natl Acad Sci U S A 118(5) PMID: 33495349
- Vernekar DV, et al. (2021) The Pif1 helicase is actively inhibited during meiotic recombination which restrains gene conversion tract length. Nucleic Acids Res 49(8):4522-4533 PMID: 33823531
- Zhou ZX, et al. (2021) How asymmetric DNA replication achieves symmetrical fidelity. Nat Struct Mol Biol 28(12):1020-1028 PMID: 34887558
- Jiménez-Martín A, et al. (2020) The Mgs1/WRNIP1 ATPase is required to prevent a recombination salvage pathway at damaged replication forks. Sci Adv 6(15):eaaz3327 PMID: 32285001
- Khristich AN, et al. (2020) Large-scale contractions of Friedreich's ataxia GAA repeats in yeast occur during DNA replication due to their triplex-forming ability. Proc Natl Acad Sci U S A 117(3):1628-1637 PMID: 31911468
- Sui Y, et al. (2020) Analysis of APOBEC-induced mutations in yeast strains with low levels of replicative DNA polymerases. Proc Natl Acad Sci U S A 117(17):9440-9450 PMID: 32277034
- Jain R, et al. (2019) Cryo-EM structure and dynamics of eukaryotic DNA polymerase δ holoenzyme. Nat Struct Mol Biol 26(10):955-962 PMID: 31582849
- Kahli M, et al. (2019) Processing of eukaryotic Okazaki fragments by redundant nucleases can be uncoupled from ongoing DNA replication in vivo. Nucleic Acids Res 47(4):1814-1822 PMID: 30541106
- Mondol T, et al. (2019) PCNA accelerates the nucleotide incorporation rate by DNA polymerase δ. Nucleic Acids Res 47(4):1977-1986 PMID: 30605530
- Singh SP, et al. (2019) Branched unwinding mechanism of the Pif1 family of DNA helicases. Proc Natl Acad Sci U S A 116(49):24533-24541 PMID: 31744872
- Markiewicz-Potoczny M, et al. (2018) A Critical Role for Dna2 at Unwound Telomeres. Genetics 209(1):129-141 PMID: 29559500
- van Mourik PM, et al. (2018) Upregulation of dNTP Levels After Telomerase Inactivation Influences Telomerase-Independent Telomere Maintenance Pathway Choice in Saccharomyces cerevisiae. G3 (Bethesda) 8(8):2551-2558 PMID: 29848621
- Bowen N and Kolodner RD (2017) Reconstitution of Saccharomyces cerevisiae DNA polymerase ε-dependent mismatch repair with purified proteins. Proc Natl Acad Sci U S A 114(14):3607-3612 PMID: 28265089
- Dennis DG, et al. (2017) Normally lethal amino acid substitutions suppress an ultramutator DNA Polymerase δ variant. Sci Rep 7:46535 PMID: 28417960
- Yeeles JTP, et al. (2017) How the Eukaryotic Replisome Achieves Rapid and Efficient DNA Replication. Mol Cell 65(1):105-116 PMID: 27989442
- Roumelioti FM, et al. (2016) Alternative lengthening of human telomeres is a conservative DNA replication process with features of break-induced replication. EMBO Rep 17(12):1731-1737 PMID: 27760777
- Stodola JL and Burgers PM (2016) Resolving individual steps of Okazaki-fragment maturation at a millisecond timescale. Nat Struct Mol Biol 23(5):402-8 PMID: 27065195
- Zheng DQ, et al. (2016) Global analysis of genomic instability caused by DNA replication stress in Saccharomyces cerevisiae. Proc Natl Acad Sci U S A 113(50):E8114-E8121 PMID: 27911848
- Johnson RE, et al. (2015) A Major Role of DNA Polymerase δ in Replication of Both the Leading and Lagging DNA Strands. Mol Cell 59(2):163-175 PMID: 26145172
- Meyer D, et al. (2015) DNA polymerases δ and λ cooperate in repairing double-strand breaks by microhomology-mediated end-joining in Saccharomyces cerevisiae. Proc Natl Acad Sci U S A 112(50):E6907-16 PMID: 26607450
- Costantino L, et al. (2014) Break-induced replication repair of damaged forks induces genomic duplications in human cells. Science 343(6166):88-91 PMID: 24310611
- Strzalka W and Ziemienowicz A (2011) Proliferating cell nuclear antigen (PCNA): a key factor in DNA replication and cell cycle regulation. Ann Bot 107(7):1127-40 PMID: 21169293
- Dieckman LM, et al. (2010) Pre-steady state kinetic studies of the fidelity of nucleotide incorporation by yeast DNA polymerase delta. Biochemistry 49(34):7344-50 PMID: 20666462
- Poltoratsky V, et al. (2010) Mutagenesis dependent upon the combination of activation-induced deaminase expression and a double-strand break. Mol Immunol 48(1-3):164-70 PMID: 20828826
- Abe H, et al. (2009) Development of valuable yeast strains using a novel mutagenesis technique for the effective production of therapeutic glycoproteins. Glycobiology 19(4):428-36 PMID: 19129247
- Abe H, et al. (2009) Ethanol-tolerant Saccharomyces cerevisiae strains isolated under selective conditions by over-expression of a proofreading-deficient DNA polymerase delta. J Biosci Bioeng 108(3):199-204 PMID: 19664552
- Galli A, et al. (2009) The pol3-t hyperrecombination phenotype and DNA damage-induced recombination in Saccharomyces cerevisiae is RAD50 dependent. J Biomed Biotechnol 2009:312710 PMID: 19834566
- Jain R, et al. (2009) Structural insights into yeast DNA polymerase delta by small angle X-ray scattering. J Mol Biol 394(3):377-82 PMID: 19818796
- Li X, et al. (2009) PCNA is required for initiation of recombination-associated DNA synthesis by DNA polymerase delta. Mol Cell 36(4):704-13 PMID: 19941829
- Ma W, et al. (2009) The transition of closely opposed lesions to double-strand breaks during long-patch base excision repair is prevented by the coordinated action of DNA polymerase delta and Rad27/Fen1. Mol Cell Biol 29(5):1212-21 PMID: 19075004
- Pike JE, et al. (2009) Pif1 helicase lengthens some Okazaki fragment flaps necessitating Dna2 nuclease/helicase action in the two-nuclease processing pathway. J Biol Chem 284(37):25170-80 PMID: 19605347
- Smith CE, et al. (2009) Aberrant double-strand break repair resulting in half crossovers in mutants defective for Rad51 or the DNA polymerase delta complex. Mol Cell Biol 29(6):1432-41 PMID: 19139272
- Swan MK, et al. (2009) Structural basis of high-fidelity DNA synthesis by yeast DNA polymerase delta. Nat Struct Mol Biol 16(9):979-86 PMID: 19718023
- Vernis L, et al. (2009) A newly identified essential complex, Dre2-Tah18, controls mitochondria integrity and cell death after oxidative stress in yeast. PLoS One 4(2):e4376 PMID: 19194512
- Baranovskiy AG, et al. (2008) X-ray structure of the complex of regulatory subunits of human DNA polymerase delta. Cell Cycle 7(19):3026-36 PMID: 18818516
- Cardone JM, et al. (2008) DNA repair by polymerase delta in Saccharomyces cerevisiae is not controlled by the proliferating cell nuclear antigen-like Rad17/Mec3/Ddc1 complex. Genet Mol Res 7(1):127-32 PMID: 18273828
- Lemoine FJ, et al. (2008) Reduced levels of DNA polymerase delta induce chromosome fragile site instability in yeast. Mol Cell Biol 28(17):5359-68 PMID: 18591249
- Maloisel L, et al. (2008) DNA polymerase delta is preferentially recruited during homologous recombination to promote heteroduplex DNA extension. Mol Cell Biol 28(4):1373-82 PMID: 18086882
- Mito E, et al. (2008) Mutagenic and recombinagenic responses to defective DNA polymerase delta are facilitated by the Rev1 protein in pol3-t mutants of Saccharomyces cerevisiae. Genetics 179(4):1795-806 PMID: 18711219
- Nick McElhinny SA, et al. (2008) Division of labor at the eukaryotic replication fork. Mol Cell 30(2):137-44 PMID: 18439893
- Sommer D, et al. (2008) Partial reconstitution of DNA large loop repair with purified proteins from Saccharomyces cerevisiae. Nucleic Acids Res 36(14):4699-707 PMID: 18628298
- Stith CM, et al. (2008) Flexibility of eukaryotic Okazaki fragment maturation through regulated strand displacement synthesis. J Biol Chem 283(49):34129-40 PMID: 18927077
- Chilkova O, et al. (2007) The eukaryotic leading and lagging strand DNA polymerases are loaded onto primer-ends via separate mechanisms but have comparable processivity in the presence of PCNA. Nucleic Acids Res 35(19):6588-97 PMID: 17905813
- Nick McElhinny SA, et al. (2007) Inefficient proofreading and biased error rates during inaccurate DNA synthesis by a mutant derivative of Saccharomyces cerevisiae DNA polymerase delta. J Biol Chem 282(4):2324-32 PMID: 17121822
- Swaminathan S, et al. (2007) Yra1 is required for S phase entry and affects Dia2 binding to replication origins. Mol Cell Biol 27(13):4674-84 PMID: 17452447
- Fortune JM, et al. (2006) RPA and PCNA suppress formation of large deletion errors by yeast DNA polymerase delta. Nucleic Acids Res 34(16):4335-41 PMID: 16936322
- Kim JH, et al. (2006) Isolation of human Dna2 endonuclease and characterization of its enzymatic properties. Nucleic Acids Res 34(6):1854-64 PMID: 16595799
- Murphy K, et al. (2006) A method to select for mutator DNA polymerase deltas in Saccharomyces cerevisiae. Genome 49(4):403-10 PMID: 16699561
- Rossi ML and Bambara RA (2006) Reconstituted Okazaki fragment processing indicates two pathways of primer removal. J Biol Chem 281(36):26051-61 PMID: 16837458
- Shimoda C, et al. (2006) Isolation of thermotolerant mutants by using proofreading-deficient DNA polymerase delta as an effective mutator in Saccharomyces cerevisiae. Genes Genet Syst 81(6):391-7 PMID: 17283384
- Stewart JA, et al. (2006) Flap endonuclease disengages Dna2 helicase/nuclease from Okazaki fragment flaps. J Biol Chem 281(50):38565-72 PMID: 17038322
- Stone JE and Petes TD (2006) Analysis of the proteins involved in the in vivo repair of base-base mismatches and four-base loops formed during meiotic recombination in the yeast Saccharomyces cerevisiae. Genetics 173(3):1223-39 PMID: 16702432
- Vijeh Motlagh ND, et al. (2006) Mgs1 and Rad18/Rad5/Mms2 are required for survival of Saccharomyces cerevisiae mutants with novel temperature/cold sensitive alleles of the DNA polymerase delta subunit, Pol31. DNA Repair (Amst) 5(12):1459-74 PMID: 16949354
- Fortune JM, et al. (2005) Saccharomyces cerevisiae DNA polymerase delta: high fidelity for base substitutions but lower fidelity for single- and multi-base deletions. J Biol Chem 280(33):29980-7 PMID: 15964835
- Garg P and Burgers PM (2005) How the cell deals with DNA nicks. Cell Cycle 4(2):221-4 PMID: 15655350
- Garg P and Burgers PM (2005) Ubiquitinated proliferating cell nuclear antigen activates translesion DNA polymerases eta and REV1. Proc Natl Acad Sci U S A 102(51):18361-6 PMID: 16344468
- Garg P, et al. (2005) Proliferating cell nuclear antigen promotes translesion synthesis by DNA polymerase zeta. J Biol Chem 280(25):23446-50 PMID: 15879599
- Gibbs PE, et al. (2005) The relative roles in vivo of Saccharomyces cerevisiae Pol eta, Pol zeta, Rev1 protein and Pol32 in the bypass and mutation induction of an abasic site, T-T (6-4) photoadduct and T-T cis-syn cyclobutane dimer. Genetics 169(2):575-82 PMID: 15520252
- Jin YH, et al. (2005) The multiple biological roles of the 3'-->5' exonuclease of Saccharomyces cerevisiae DNA polymerase delta require switching between the polymerase and exonuclease domains. Mol Cell Biol 25(1):461-71 PMID: 15601866
- Kim DH, et al. (2005) Enzymatic properties of the Caenorhabditis elegans Dna2 endonuclease/helicase and a species-specific interaction between RPA and Dna2. Nucleic Acids Res 33(4):1372-83 PMID: 15745997
- Li L, et al. (2005) Sensitivity to phosphonoacetic acid: a new phenotype to probe DNA polymerase delta in Saccharomyces cerevisiae. Genetics 170(2):569-80 PMID: 15802517
- Bhattacharyya S and Lahue RS (2004) Saccharomyces cerevisiae Srs2 DNA helicase selectively blocks expansions of trinucleotide repeats. Mol Cell Biol 24(17):7324-30 PMID: 15314145
- Boiteux S and Guillet M (2004) Abasic sites in DNA: repair and biological consequences in Saccharomyces cerevisiae. DNA Repair (Amst) 3(1):1-12 PMID: 14697754
- Garg P, et al. (2004) Idling by DNA polymerase delta maintains a ligatable nick during lagging-strand DNA replication. Genes Dev 18(22):2764-73 PMID: 15520275
- Johansson E, et al. (2004) The Pol32 subunit of DNA polymerase delta contains separable domains for processive replication and proliferating cell nuclear antigen (PCNA) binding. J Biol Chem 279(3):1907-15 PMID: 14594808
- Maloisel L, et al. (2004) A role for DNA polymerase delta in gene conversion and crossing over during meiosis in Saccharomyces cerevisiae. Genetics 167(3):1133-42 PMID: 15280229
- Sanchez Garcia J, et al. (2004) The C-terminal zinc finger of the catalytic subunit of DNA polymerase delta is responsible for direct interaction with the B-subunit. Nucleic Acids Res 32(10):3005-16 PMID: 15173383
- Ayyagari R, et al. (2003) Okazaki fragment maturation in yeast. I. Distribution of functions between FEN1 AND DNA2. J Biol Chem 278(3):1618-25 PMID: 12424238
- Chanet R and Heude M (2003) Characterization of mutations that are synthetic lethal with pol3-13, a mutated allele of DNA polymerase delta in Saccharomyces cerevisiae. Curr Genet 43(5):337-50 PMID: 12759774
- Chilkova O, et al. (2003) The quaternary structure of DNA polymerase epsilon from Saccharomyces cerevisiae. J Biol Chem 278(16):14082-6 PMID: 12571237
- Galli A, et al. (2003) Characterization of the hyperrecombination phenotype of the pol3-t mutation of Saccharomyces cerevisiae. Genetics 164(1):65-79 PMID: 12750321
- Branzei D, et al. (2002) The product of Saccharomyces cerevisiae WHIP/MGS1, a gene related to replication factor C genes, interacts functionally with DNA polymerase delta. Mol Genet Genomics 268(3):371-86 PMID: 12436259
- Garber PM and Rine J (2002) Overlapping roles of the spindle assembly and DNA damage checkpoints in the cell-cycle response to altered chromosomes in Saccharomyces cerevisiae. Genetics 161(2):521-34 PMID: 12072451
- Hishida T, et al. (2002) Saccharomyces cerevisiae MGS1 is essential in strains deficient in the RAD6-dependent DNA damage tolerance pathway. EMBO J 21(8):2019-29 PMID: 11953321
- Ionescu CN, et al. (2002) Monomeric yeast PCNA mutants are defective in interacting with and stimulating the ATPase activity of RFC. Biochemistry 41(43):12975-85 PMID: 12390024
- Ohya T, et al. (2002) The DNA polymerase domain of pol(epsilon) is required for rapid, efficient, and highly accurate chromosomal DNA replication, telomere length maintenance, and normal cell senescence in Saccharomyces cerevisiae. J Biol Chem 277(31):28099-108 PMID: 12015307
- Podust VN, et al. (2002) Reconstitution of human DNA polymerase delta using recombinant baculoviruses: the p12 subunit potentiates DNA polymerizing activity of the four-subunit enzyme. J Biol Chem 277(6):3894-901 PMID: 11711545
- Hübscher U and Seo YS (2001) Replication of the lagging strand: a concert of at least 23 polypeptides. Mol Cells 12(2):149-57 PMID: 11710514
- Johansson E, et al. (2001) Structure of DNA polymerase delta from Saccharomyces cerevisiae. J Biol Chem 276(47):43824-8 PMID: 11568188
- Ola A, et al. (2001) Human-Saccharomyces cerevisiae proliferating cell nuclear antigen hybrids: oligomeric structure and functional characterization using in vitro DNA replication. J Biol Chem 276(13):10168-77 PMID: 11094057
- Petrov AV, et al. (2001) A specific DNA-dependent DNA polymerase is associated with Saccharomyces cerevisiae telomerase. Biochemistry (Mosc) 66(12):1361-7 PMID: 11812242
- Araújo SJ, et al. (2000) Nucleotide excision repair of DNA with recombinant human proteins: definition of the minimal set of factors, active forms of TFIIH, and modulation by CAK. Genes Dev 14(3):349-59 PMID: 10673506
- Bae SH and Seo YS (2000) Characterization of the enzymatic properties of the yeast dna2 Helicase/endonuclease suggests a new model for Okazaki fragment processing. J Biol Chem 275(48):38022-31 PMID: 10984490
- Campbell MR, et al. (2000) Candidate mutator genes in mismatch repair-deficient thymic lymphomas: no evidence of mutations in the DNA polymerase delta gene. Carcinogenesis 21(12):2281-5 PMID: 11133819
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- Huang ME, et al. (2000) POL32, a subunit of the Saccharomyces cerevisiae DNA polymerase delta, defines a link between DNA replication and the mutagenic bypass repair pathway. Curr Genet 38(4):178-87 PMID: 11126776
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- Mo J, et al. (2000) Evidence that DNA polymerase delta isolated by immunoaffinity chromatography exhibits high-molecular weight characteristics and is associated with the KIAA0039 protein and RPA. Biochemistry 39(24):7245-54 PMID: 10852724
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