Phenotype Help

RML2 / YEL050C Phenotype

Phenotype annotations for a gene are curated single mutant phenotypes that require an observable (e.g., "cell shape"), a qualifier (e.g., "abnormal"), a mutant type (e.g., null), strain background, and a reference. In addition, annotations are classified as classical genetics or high-throughput (e.g., large scale survey, systematic mutation set). Whenever possible, allele information and additional details are provided.


Summary
RML2/YEL050C is a non-essential gene in reference strain S288C; null mutants are viable but grow slowly, form petites, and display haploinsufficiency, decreased cell size, and decreased competitive fitness. Null mutants exhibit abnormal chromosome/plasmid maintenance, absent or decreased mitochondrial genome maintenance, abnormal mitochondrial morphology, abnormal vacuolar morphology, absent or decreased respiratory growth, and decreased biofilm formation. Null mutants show abnormal, decreased, and increased accumulation of different chemical compounds and decreased utilization of nitrogen sources. Stress resistance phenotypes are context-dependent: null mutants display increased heat sensitivity, decreased innate thermotolerance, decreased metal resistance, increased oxidative stress resistance, variable overall stress resistance (increased in some conditions), variable resistance to chemicals (both increased and decreased depending on the compound), and variable toxin resistance (both increased and decreased depending on the toxin). Lifespan effects include decreased chronological lifespan but increased replicative lifespan. Conditional alleles show decreased respiratory growth and absent utilization of certain carbon sources. Overexpression of RML2 results in abnormal cell cycle progression.

Annotations

A phenotype is defined as an observable (e.g., apoptosis) and a qualifier (e.g., increased). There may be more than one row with the same phenotype if that phenotype was observed in separate studies or in different conditions, strains, alleles, etc.


Increase the total number of rows showing on this page using the pull-down located below the table, or use the page scroll at the table's top right to browse through the table's pages; use the arrows to the right of a column header to sort by that column; filter the table using the "Filter" box at the top of the table; click on the small "i" buttons located within a cell for an annotation to view further details.

Gene Phenotype Experiment Type Mutant Information Strain Background Chemical Details Reference

Shared Phenotypes

This diagram displays phenotype observables (purple squares) that are shared between the given gene (yellow circle) and other genes (gray circles) based on the number of phenotype observables shared (adjustable using the slider at the bottom).


Reset

Click on a gene or phenotype observable name to go to its specific page within SGD; drag any of the gene or observable objects around within the visualization for easier viewing; click “Reset” to automatically redraw the diagram; filter the genes that share observable terms with the given gene by the number of terms they share by clicking anywhere on the slider bar or dragging the tab to the desired filter number.


Resources