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VPS501 / YKR078W Sequence

Sequences and genome annotation information for Reference Strain S288C and a select set of Alternative References.

Aliases
VIN1 7
Protein Product
sorting nexin family protein
Feature Type
ORF , Verified
Paralog
VPS5 5
Summary
VPS501/YKR078W is located on the right arm of chromosome XI between transcriptional activator MSA2 and tRNA endonuclease TRZ1; coding sequence is 1758 nucleotides long with 13 synonymous and 13 nonsynonymous SNPs; VPS501 has paralog VPS5 that arose from the whole genome duplication

Resources

AlphaFold Protein Structure | Gene/Sequence Resources | JBrowse | UniProtKB

S288C only

BLASTN | BLASTP | Design Primers | Restriction Fragment Map | Restriction Fragment Sizes | Six-Frame Translation

S288C vs. other species

BLASTN vs. fungi | BLASTP at NCBI | BLASTP vs. fungi | CGD Synteny Browser

S288C vs. other strains

Strain Alignment | Variant Viewer