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COT1 / YOR316C Sequence

Sequences and genome annotation information for Reference Strain S288C and a select set of Alternative References.

Protein Product
metal cation transporter COT1
Feature Type
ORF , Verified
Paralog
ZRC1 4
Summary
COT1/YOR316C is located on the right arm of chromosome XV between putative transcription factor SFG1 and uncharacterized protein YOR316C-A; coding sequence is 1320 nucleotides long; gene structure includes 4 deletions in different alternative reference strains, with 8 synonymous and 8 nonsynonymous SNPs; COT1 has a paralog, ZRC1, that arose from the whole genome duplication

Resources

AlphaFold Protein Structure | Gene/Sequence Resources | JBrowse | UniProtKB

S288C only

BLASTN | BLASTP | Design Primers | Restriction Fragment Map | Restriction Fragment Sizes | Six-Frame Translation

S288C vs. other species

BLASTN vs. fungi | BLASTP at NCBI | BLASTP vs. fungi | CGD Synteny Browser

S288C vs. other strains

Strain Alignment | Variant Viewer