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SPT23 / YKL020C Sequence

Sequences and genome annotation information for Reference Strain S288C and a select set of Alternative References.

Feature Type
ORF , Verified
Paralog
MGA2 4
Summary
SPT23/YKL020C is located on the left arm of chromosome XI between alpha subunit of farnesyltransferase and geranylgeranyltransferase-I RAM2 and protein involved in 60S ribosomal subunit biogenesis MAK11; coding sequence is 3249 nucleotides long with 31 SNPs, 9 of which cause amino acid polymorphisms; alternative reference strain Sigma1278b has a deletion at nucleotides 398840..398832; SPT23 has a paralog, MGA2, that arose from the whole genome duplication

Resources

AlphaFold Protein Structure | Gene/Sequence Resources | JBrowse | UniProtKB

S288C only

BLASTN | BLASTP | Design Primers | Restriction Fragment Map | Restriction Fragment Sizes | Six-Frame Translation

S288C vs. other species

BLASTN vs. fungi | BLASTP at NCBI | BLASTP vs. fungi | CGD Synteny Browser

S288C vs. other strains

Strain Alignment | Variant Viewer